Index

A

aggregate() (in module niimpy.preprocessing.util) ALL (class in niimpy.reading.database) app_count() (in module niimpy.preprocessing.application) app_duration() (in module niimpy.preprocessing.application) audio_count_loud() (in module niimpy.preprocessing.audio) audio_count_silent() (in module niimpy.preprocessing.audio) audio_count_speech() (in module niimpy.preprocessing.audio) audio_max_db() (in module niimpy.preprocessing.audio)

audio_max_freq() (in module niimpy.preprocessing.audio) audio_mean_db() (in module niimpy.preprocessing.audio) audio_mean_freq() (in module niimpy.preprocessing.audio) audio_median_db() (in module niimpy.preprocessing.audio) audio_median_freq() (in module niimpy.preprocessing.audio) audio_min_db() (in module niimpy.preprocessing.audio) audio_min_freq() (in module niimpy.preprocessing.audio) audio_std_db() (in module niimpy.preprocessing.audio) audio_std_freq() (in module niimpy.preprocessing.audio)

B

bar() (in module niimpy.exploration.eda.missingness) bar_count() (in module niimpy.exploration.eda.missingness) barplot_() (in module niimpy.exploration.eda.countplot) battery_charge_discharge() (in module niimpy.preprocessing.battery) battery_discharge() (in module niimpy.preprocessing.battery) battery_gaps() (in module niimpy.preprocessing.battery)

battery_mean_level() (in module niimpy.preprocessing.battery) battery_median_level() (in module niimpy.preprocessing.battery) battery_occurrences() (in module niimpy.preprocessing.battery) battery_shutdown_time() (in module niimpy.preprocessing.battery) battery_std_level() (in module niimpy.preprocessing.battery) boxplot_() (in module niimpy.exploration.eda.countplot)

C

calculate_averages_() (in module niimpy.exploration.eda.lineplot) calculate_bins() (in module niimpy.exploration.eda.countplot) call_count() (in module niimpy.preprocessing.communication) call_distribution() (in module niimpy.preprocessing.communication) call_duration_mean() (in module niimpy.preprocessing.communication) call_duration_median() (in module niimpy.preprocessing.communication) call_duration_std() (in module niimpy.preprocessing.communication) call_duration_total() (in module niimpy.preprocessing.communication) call_outgoing_incoming_ratio() (in module niimpy.preprocessing.communication) categorize_answers() (in module niimpy.exploration.eda.categorical) classify_app() (in module niimpy.preprocessing.application)

clean_survey_column_names() (in module niimpy.preprocessing.survey) cluster_locations() (in module niimpy.preprocessing.location) combine_dataframe_() (in module niimpy.exploration.eda.punchcard) compute_nbin_maxdist_home() (in module niimpy.preprocessing.location) compute_rhythms() (in module niimpy.analysis.rhythms) convert_survey_to_numerical_answer() (in module niimpy.preprocessing.survey) count() (niimpy.reading.database.Data1 method) countplot() (in module niimpy.exploration.eda.countplot) create_categorical_dataframe() (in module niimpy.exploration.setup_dataframe) create_dataframe() (in module niimpy.exploration.setup_dataframe) create_missing_dataframe() (in module niimpy.exploration.setup_dataframe) create_timeindex_dataframe() (in module niimpy.exploration.setup_dataframe)

D

Data1 (class in niimpy.reading.database) date_range() (in module niimpy.preprocessing.util) df_normalize() (in module niimpy.preprocessing.util)

distance_matrix() (in module niimpy.preprocessing.location) duration_to_timedelta() (in module niimpy.reading.mhealth) duration_util_screen() (in module niimpy.preprocessing.screen)

E

event_classification_screen() (in module niimpy.preprocessing.screen) execute() (niimpy.reading.database.Data1 method) exists() (niimpy.reading.database.Data1 method) extract_features_app() (in module niimpy.preprocessing.application) extract_features_audio() (in module niimpy.preprocessing.audio)

extract_features_battery() (in module niimpy.preprocessing.battery) extract_features_comms() (in module niimpy.preprocessing.communication) extract_features_location() (in module niimpy.preprocessing.location) extract_features_screen() (in module niimpy.preprocessing.screen) extract_features_survey() (in module niimpy.preprocessing.survey) extract_features_tracker() (in module niimpy.preprocessing.tracker)

F

filter_dataframe() (in module niimpy.preprocessing.filter) filter_location() (in module niimpy.preprocessing.location) finalize() (niimpy.reading.database.sqlite3_stdev method) find_battery_gaps() (in module niimpy.preprocessing.battery) find_home() (in module niimpy.preprocessing.location) find_non_battery_gaps() (in module niimpy.preprocessing.battery)

find_real_gaps() (in module niimpy.preprocessing.battery) first() (niimpy.reading.database.Data1 method) format_battery_data() (in module niimpy.preprocessing.battery) format_column_names() (in module niimpy.preprocessing.util) format_part_of_day() (in module niimpy.reading.mhealth) format_time_interval() (in module niimpy.reading.mhealth)

G

geolocation() (in module niimpy.reading.mhealth) geolocation_from_file() (in module niimpy.reading.mhealth) get_counts() (in module niimpy.exploration.eda.countplot) get_speeds_totaldist() (in module niimpy.preprocessing.location) get_survey_score() (niimpy.reading.database.Data1 method) get_timerange_() (in module niimpy.exploration.eda.punchcard) get_xticks_() (in module niimpy.exploration.eda.categorical)

group_data() (in module niimpy.preprocessing.application) (in module niimpy.preprocessing.audio) (in module niimpy.preprocessing.battery) (in module niimpy.preprocessing.communication) (in module niimpy.preprocessing.location) (in module niimpy.preprocessing.screen) (in module niimpy.preprocessing.survey) (in module niimpy.preprocessing.tracker)

H

heart_rate() (in module niimpy.reading.mhealth) heart_rate_from_file() (in module niimpy.reading.mhealth)

heatmap() (in module niimpy.exploration.eda.missingness) hourly() (niimpy.reading.database.Data1 method)

I

install_extensions() (in module niimpy.preprocessing.util)

L

last() (niimpy.reading.database.Data1 method) location_distance_features() (in module niimpy.preprocessing.location)

location_number_of_significant_places() (in module niimpy.preprocessing.location) location_significant_place_features() (in module niimpy.preprocessing.location)

M

matrix() (in module niimpy.exploration.eda.missingness) message_count() (in module niimpy.preprocessing.communication) message_distribution() (in module niimpy.preprocessing.communication) message_outgoing_incoming_ratio() (in module niimpy.preprocessing.communication) missing_data_format() (in module niimpy.exploration.missingness) missing_noise() (in module niimpy.exploration.missingness) module niimpy niimpy.analysis niimpy.analysis.rhythms niimpy.config niimpy.config.config niimpy.exploration niimpy.exploration.eda niimpy.exploration.eda.categorical niimpy.exploration.eda.countplot niimpy.exploration.eda.lineplot niimpy.exploration.eda.missingness niimpy.exploration.eda.punchcard niimpy.exploration.missingness niimpy.exploration.setup_dataframe niimpy.preprocessing niimpy.preprocessing.application niimpy.preprocessing.audio niimpy.preprocessing.battery niimpy.preprocessing.communication niimpy.preprocessing.filter niimpy.preprocessing.location niimpy.preprocessing.sampledata niimpy.preprocessing.screen niimpy.preprocessing.survey niimpy.preprocessing.tracker niimpy.preprocessing.util niimpy.reading niimpy.reading.database niimpy.reading.mhealth niimpy.reading.read

N

niimpy module niimpy.analysis module niimpy.analysis.rhythms module niimpy.config module niimpy.config.config module niimpy.exploration module niimpy.exploration.eda module niimpy.exploration.eda.categorical module niimpy.exploration.eda.countplot module niimpy.exploration.eda.lineplot module niimpy.exploration.eda.missingness module niimpy.exploration.eda.punchcard module niimpy.exploration.missingness module niimpy.exploration.setup_dataframe module niimpy.preprocessing module

niimpy.preprocessing.application module niimpy.preprocessing.audio module niimpy.preprocessing.battery module niimpy.preprocessing.communication module niimpy.preprocessing.filter module niimpy.preprocessing.location module niimpy.preprocessing.sampledata module niimpy.preprocessing.screen module niimpy.preprocessing.survey module niimpy.preprocessing.tracker module niimpy.preprocessing.util module niimpy.reading module niimpy.reading.database module niimpy.reading.mhealth module niimpy.reading.read module number_of_significant_places() (in module niimpy.preprocessing.location)

O

occurrence() (in module niimpy.preprocessing.util) (niimpy.reading.database.Data1 method)

open() (in module niimpy.reading.database)

P

plot_averages_() (in module niimpy.exploration.eda.lineplot) plot_categories() (in module niimpy.exploration.eda.categorical) plot_grouped_categories() (in module niimpy.exploration.eda.categorical)

plot_timeseries_() (in module niimpy.exploration.eda.lineplot) punchcard_() (in module niimpy.exploration.eda.punchcard) punchcard_plot() (in module niimpy.exploration.eda.punchcard)

Q

question_by_group() (in module niimpy.exploration.eda.categorical)

questionnaire_grouped_summary() (in module niimpy.exploration.eda.categorical) questionnaire_summary() (in module niimpy.exploration.eda.categorical)

R

raw() (niimpy.reading.database.Data1 method) read_csv() (in module niimpy.reading.read) read_csv_string() (in module niimpy.reading.read) read_sqlite() (in module niimpy.reading.read) read_sqlite_tables() (in module niimpy.reading.read) resample_data_() (in module niimpy.exploration.eda.lineplot) reset_groups() (in module niimpy.preprocessing.application) (in module niimpy.preprocessing.audio) (in module niimpy.preprocessing.battery) (in module niimpy.preprocessing.communication) (in module niimpy.preprocessing.location) (in module niimpy.preprocessing.screen) (in module niimpy.preprocessing.survey) (in module niimpy.preprocessing.tracker)

rhythm() (in module niimpy.analysis.rhythms)

S

screen_count() (in module niimpy.preprocessing.screen) screen_duration() (in module niimpy.preprocessing.screen) screen_duration_max() (in module niimpy.preprocessing.screen) screen_duration_mean() (in module niimpy.preprocessing.screen) screen_duration_median() (in module niimpy.preprocessing.screen) screen_duration_min() (in module niimpy.preprocessing.screen) screen_duration_std() (in module niimpy.preprocessing.screen) screen_first_unlock() (in module niimpy.preprocessing.screen) screen_missing_data() (in module niimpy.exploration.missingness)

screen_off() (in module niimpy.preprocessing.screen) set_encoding() (in module niimpy.preprocessing.util) set_tz() (in module niimpy.preprocessing.util) shutdown_info() (in module niimpy.preprocessing.battery) sqlite3_stdev (class in niimpy.reading.database) step() (niimpy.reading.database.sqlite3_stdev method) step_summary() (in module niimpy.preprocessing.tracker) sum_survey_scores() (in module niimpy.preprocessing.survey) survey_statistic() (in module niimpy.preprocessing.survey)

T

tables() (niimpy.reading.database.Data1 method) timeplot() (in module niimpy.exploration.eda.lineplot) timestamps() (niimpy.reading.database.Data1 method) tmp_timezone() (in module niimpy.preprocessing.util)

to_datetime() (in module niimpy.preprocessing.util) total_sleep_time() (in module niimpy.reading.mhealth) total_sleep_time_from_file() (in module niimpy.reading.mhealth) tracker_step_distribution() (in module niimpy.preprocessing.tracker)

U

uninstall_extensions() (in module niimpy.preprocessing.util) user_table_counts() (niimpy.reading.database.Data1 method)

users() (niimpy.reading.database.Data1 method) util_screen() (in module niimpy.preprocessing.screen)

V

validate_username() (niimpy.reading.database.Data1 method)